CDS
| Accession Number | TCMCG077C10653 |
| gbkey | CDS |
| Protein Id | KAF5735909.1 |
| Location | complement(join(211432..211552,211673..211726,211865..211936,212017..215123,215208..215466,215762..216048,216148..216483,216571..216712,216798..217018,217130..217291,217470..217673)) |
| Organism | Tripterygium wilfordii |
| locus_tag | HS088_TW14G00038 |
Protein
| Length | 1654aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA542587, BioSample:SAMN11634134 |
| db_source | JAAARO010000014.1 |
| Definition | DNA-directed RNA polymerase II subunit 1-like isoform X5 [Tripterygium wilfordii] |
| Locus_tag | HS088_TW14G00038 |
EGGNOG-MAPPER Annotation
| COG_category | K |
| Description | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates |
| KEGG_TC | - |
| KEGG_Module |
M00180
[VIEW IN KEGG] |
| KEGG_Reaction |
R00435
[VIEW IN KEGG] R00441 [VIEW IN KEGG] R00442 [VIEW IN KEGG] R00443 [VIEW IN KEGG] |
| KEGG_rclass |
RC02795
[VIEW IN KEGG] |
| BRITE |
br01611
[VIEW IN KEGG] ko00000 [VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03021 [VIEW IN KEGG] ko03400 [VIEW IN KEGG] |
| KEGG_ko |
ko:K03006
[VIEW IN KEGG] |
| EC |
2.7.7.6
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00230
[VIEW IN KEGG] ko00240 [VIEW IN KEGG] ko01100 [VIEW IN KEGG] ko03020 [VIEW IN KEGG] ko05016 [VIEW IN KEGG] ko05168 [VIEW IN KEGG] ko05169 [VIEW IN KEGG] map00230 [VIEW IN KEGG] map00240 [VIEW IN KEGG] map01100 [VIEW IN KEGG] map03020 [VIEW IN KEGG] map05016 [VIEW IN KEGG] map05168 [VIEW IN KEGG] map05169 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGATTATAATTTGCTGCATGGTGTTTATAGTTAATCGTGTGCAGGTTCTCAGTGTTCTAAAGAGGATAAGTGATGAGGACTGTGGATTATTGGGTTTAGACCCTAAGTATGCCCGTCCTGATTGGATGATTCTTCAAGTGCTTCCAATTCCTCCACCTCCTGTGAGGCCCTCTGTGATGATGGACACCTCGTCGAGGAGTGAGGATGATTTGACCCATCAGTTAGCCATGATTATTAGGCACAATGAAAATCTTCGTAGACAAGAGAGGAATGGGTCAGCTGCACATATCATATCTGAGTTTGCTCAGTTGTTGCAGTTCCATGTAGCCACCTATTTTGACAATGAGTTACCTGGACAGCCTAGGGCAACGCAGAGATCTGGTAGACCTATTAAGTCAATATGTAGCAGGCTTAAGGCAAAAGAAGGGCGGATTCGGGGTAACTTGATGGGGAAACGTGTGGATTTTTCTGCACGAACAGTTATTACACCAGATCCCACCATTAATATTGATGAACTGGGGGTACCATGGAGTATTGCCCTAAATCTCACGTATCCGGAAACTGTAACTCCATATAACATTGAAAGATTAAAGGAGCTTGTTGAGTATGGGCCACATCCTCCGCCTGGCAAAACTGGTGCCAAGTATATCATTAGGGATGATGGGCAGAGGCTTGATCTACGTTACTTGAAGAAAAGCAGTGATCACCACTTAGAGCTTGGTTACAAGGTAGAGAGGCATTTGCAAGATGGGGACTTTGTCCTCTTTAATCGTCAGCCAAGTCTCCATAAGATGTCTATAATGGGTCACAGGATTAAGATTATGCCATATTCGACGTTCCGCCTTAACTTGTCTGTGACGTCACCATATAACGCTGATTTTGATGGCGATGAAATGAATATGCATGTTCCTCAGTCATTTGAAACCAGGGCAGAAGTTTTGGAGCTGATGATGGTACCTAAATGTATAGTATCCCCTCAAGCAAATCGGCCTGTAATGGGAATTGTGCAGGACACCCTTTTAGGATGTCGTAAAATCACAAAGAGAGATACCTTTATAGAAAAGGATGTTTTCATGAACATCTTGATGTGGTGGGAAGATTTTGATGGGAAAATTCCTGCCCCTGCAGTTCTTAAGCCACGTCCACTTTGGACTGGCAAACAAGTTTTTAATCTGATTATACCGAAGCCAATTAATTTATTGAGAACTTCTGCCTGGCACTCAGAGTCAGAAACTGGGTTCATTACACCTGGGGATACTCAAGTACGGATTGAAAAAGGGGAGCTTCTTGCTGGAACTCTTTGCAAGAGGGCACTTGGTACTTCAACTGGAAGTCTTATACACGTTATTTGGGAAGAGGTTGGTCCTGATGCAGCTCGCAAATTTTTGGGACATACACAGTGGCTTGTTAATTATTGGCTTCTGCAGAATGGTTTTAGTATAGGGATCGGAGATACAATTGCTGATGCTGCAACGATGGAGAAAATCAATGAAACCATATCAAAAGCCAAAAATGATGTGAAAGAACTAATCAAACATGCTCAAAATAAGGATTTGGAACCTGAACCTGGTCGAACCATGATGGAATCATTTGAAAACAAAGTGAATCAGGTGTTGAATAGAGCTCGTGACGACGCTGGAAGTAGTGCACAGAAGAGTTTATCCGAGAGCAACAATCTGAAGGCTATGGTCACTGCAGGATCCAAGGGAAGTTTCATTAACATATCGCAGATGACTGCTTGTGTGGGACAGCAGAATGTTGAGGGTAAGCGAATCCCTTATGGATTCATAGATCGGACATTACCACATTTCACCAAAGATGATTATGGGCCAGAAAGTCGTGGTTTTGTTGAGAACTCATACCTACGTGGATTGACTCCGCAAGAGTTTTTTTTCCACGCCATGGGTGGTAGAGAAGGTCTAATAGACACTGCTGTTAAAACTTCTGAAACTGGTTATATCCAGCGGCGACTAGTGAAAGCTATGGAGGATATTATGGTCAAGTATGATGGGACTGTGAGGAACTCGTTGGGGGATGTTATTCAATTTCTATACGGAGAAGATGGTATGGATTCCGTTTGGATAGAGTCGCAGAAGTTGGATTCCTTAAAAATGAAGAAATCAGATTTTGATAGGGTCTTCAGATACGAGATAGATGATCCCAGCTGGAGTCCAAATTACATGTTGCCAGAACATGTTACAGATTTGCAAGATATTAAAGAACTTCGTGATGTGTTTAATGCTGAAGTTCAAAAACTTGAAGGAGATAGGTACCAACTCGGAACAGAGATAGCAACCACAGGTGACAATACTTGGCCAATGCCTGTTAACCTCAAGAGGCTTATCTGGAATGCACAGAAGACTTTCAAGGTTGACTTCCGAAGGCCCTCTGATTTGCACCCAGTGGAAGTTGTAGATGCTGTTGATAAACTTCAAGAGAGGTTGAAGGTTGTTCCTGGGGATGATCGGTTGAGTATGGAGGCTCAGAAAAATGCGACCCTTTTCTTCAATATTCTGCTTCGGAGCACATTGGCTAGTAAAAGAGTGTTGCAGGAGTACAGGCTTACTCGTGAAGCATTTGAGTGGGTTATTGGTGAGATAGAGTCACGATTTTTACAATCCTTGGTAGCTCCTGGGGAAATGATAGGTTGTGTTGCTGCACAATCTATTGGGGAACCTGCTACTCAGATGACTCTCAACACCTTTCACTATGCTGGTGTGAGTGCAAAAAATGTAACTCTTGGTGTTCCCAGGTTGAGGGAGATCATTAATGTTGCCAAGAAGATCAAAACACCTTCTCTGTCTGTTTACCTCACACCCGATGTTAGTAGAACGAAGGAGAGGGCCAAGAATGTACAATGTGCTTTGGAATACACCACTCTTCGAAGTGTCACCCAAGCTACAGAAGTTTGGTATGACCCAGATCCCATGACCACAATAATTGAAGAGGATAGTGATTTTGTCAGGTCTTACTATGAAATGCCGGATGAAGAAGTAGCACCTGAAAAGATCTCTCCTTGGTTACTTCGTATAGAGTTGAACCGTGAAATGATGGTAGATAAGAAGTTAAGCATGGCTGATATTGCTGAGAAGATCAACCTTGAATTTGATGATGACTTGACGTGTATTTTCAATGACGATAATGCTGAAAAACTGATCCTTCGCATCCGCATCATGAATGATGAAGCCCCTAAGGGAGAGCTGGAAGGTGATGAATCGGCAGAAGATGATGTTTTCCTCAAGAAAATTGAGAGTAACATGCTGACAGAAATGGCTCTTAGAGGCATCCCAGATATTAACAAGGTGTTCATTAAGCATGGGAAAGTAAGCAAGTTCGATGAGAATGAAGGTTTTAAAACAAGTGAGGAATGGATGCTGGATACAGAAGGCGTTAACCTCTTGGCTGTTATGTGTAATGAGAATGTCGATGCAAGGAGGACAACGAGTAATCACTTGATTGAAATCATTGAAGTATTGGGGATTGAGGCAGTTCGTCGGTCCTTGTTGGATGAACTGAGGGTCGTTATATCTTTTGATGGATCTTATGTGAATTACAGGCATCTGGCTATCCTATGTGATACTATGACCTATCGTGGCCACTTGATGGCTATTACCCGTCATGGTATCAATCGGAATGATACTGGGCCCATGATGAGGTGCTCCTTTGAAGAAACCGTGGACATTCTTCTTGATGCTGCTGTGTATGCCGAAACTGATTATTTGAGGGGGGTTACAGAAAATATAATGTTAGGTCAGCTTGCGCCAATTGGCACGGGAGACTGCTCACTTTATCTCAATGATGAAATGCTGAAGAATGCCATTGAACTTCAGCTACCAAGCTATATGGATGGCCTGGATTTTGGCATGACACCTGCCCGTTCTCCCATCTCGGGAACCCCTTATCATGATGGTATGATGTCTCCAAATTACGCGCTGAGCCCGAATCTCCGTCTATCGCCCATTTCAGATGCTCAGTTTTCACCTTATGTTGGTGGAATGGCATTTTCCCCTACTTCTTCTCCGGGCTACAGCCCCTCATCACCGGGATACAGTCCCTCATCACCGGGATACAGCCCCACCTCTCCCGGGTACAGCCCCACCTCTCCTGGGTACAGCCCCACATCGCCTGGCTACAGCCCAACTTCACCTACATACAGCCCTAGTTCTCCTGGTTATAGCCCGACGAGTCCTGCCTATTCTCCTACAAGTCCATCCTACTCTCCTTCGTCACCCAGCTACAGCCCCACGTCTCCCAGTTACAGCCCGACATCTCCCAGTTACAGCCCCACATCTCCAAGTTACAGCCCCACGTCTCCTAGCTACAGTCCAACTTCACCTAGTTATAGCCCCACATCTCCGGTTTATAGCCCCACCTCCCCGGCATACAGCCCCACCTCACCAGCATATAGTCCAACCTCGCCTTCCTACAGCCCGACGTCGCCTTCCTACAGCCCGACATCGCCTTCCTACAGCCCGACGTCGCCGTCCTACAGCCCGACGTCGCCTTCTTATAGCCCTACTTCACCAGCTTATAGTCCCACTTCACCTGGTTACAGTCCAACCTCGCCAAGTTACAGCCCTACCTCACCTAGTTACAGCCCTACGTCACCGAGCTACAATCCCCAGTCAGCAAAATATAGCCCCTCGCTTGCATATTCACCAAGCAGTCCAAGATTGTCACCATCCAGTCCTTACAGTCCTACTTCTCCAAATTACAGCCCAACTTCACCATCAATTTCTCCTACATCTCCATCGTATTCTCCTTCAGGTCCAACCTACAGTCCCAGCAGTCCATATAATTCTGGAGTGAACCCGGACTACAGCCCAAGCTCACCACAGTACAGTCCAAGTGCTGGGTATTCACCAAGTGCACCTGGGTATTCGCCATCCTCTACCAGTCAGTATACACCTCAAACGAGCAAGAAGGACGAAAGGAATGATAAGGATGATATGAGTACTCCTTGA |
| Protein: MIIICCMVFIVNRVQVLSVLKRISDEDCGLLGLDPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSAAHIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAVLKPRPLWTGKQVFNLIIPKPINLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKRALGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKHAQNKDLEPEPGRTMMESFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKSDFDRVFRYEIDDPSWSPNYMLPEHVTDLQDIKELRDVFNAEVQKLEGDRYQLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKVDFRRPSDLHPVEVVDAVDKLQERLKVVPGDDRLSMEAQKNATLFFNILLRSTLASKRVLQEYRLTREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLTPDVSRTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMTTIIEEDSDFVRSYYEMPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELEGDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVSKFDENEGFKTSEEWMLDTEGVNLLAVMCNENVDARRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGDCSLYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPISGTPYHDGMMSPNYALSPNLRLSPISDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSISPTSPSYSPSGPTYSPSSPYNSGVNPDYSPSSPQYSPSAGYSPSAPGYSPSSTSQYTPQTSKKDERNDKDDMSTP |